Commit graph

271 commits

Author SHA1 Message Date
milesial 9fb406b393 Clarification in README
Former-commit-id: 02644ec8e673f54006c8cc1523610e149e84ceb5
2020-06-01 11:20:34 -07:00
milesial 0731ea2ff2 Update python version in README
Former-commit-id: e5039519d57e39e7efb91183e29d39c049ba3100
2020-05-21 23:34:03 -07:00
milesial b83c81f30b Change back to train mode after eval
Former-commit-id: 773ef215d41c1f36dc0ed4159c12df89d792fbc3
2020-05-05 09:15:07 -07:00
milesial 74a3f2496f Merge pull request #167 from HansBambel/master
diffX and diffY is now an int instead of a Tensor

Former-commit-id: d66f2c3d35c1c7dc58c6d35c6ee6aa05cacfbccf
2020-04-24 10:59:11 -07:00
HansBambel ef14c0e829 diffX and diffY is now an int instead of a Tensor
Former-commit-id: 342d4e0a8ca19bbee77256caeda0ef6537d746f8
2020-04-24 15:57:53 +02:00
milesial c57180e90c Merge pull request #161 from somehower/master
optimize the passed in parameters in the case of bilinear

Former-commit-id: 5f37e8a6dc592563593210371cebd40f95788080
2020-04-17 09:29:20 -07:00
hushenghao b5a3b207a1 optimize the passed in parameters in the case of bilinear
Former-commit-id: 6234bd1c4608cac8a64d8658e9af82b60a227859
2020-04-17 23:00:11 +08:00
milesial 8b1fee8730 Merge pull request #151 from joshmyersdean/master
Fix tensorboard dependency issue

Former-commit-id: 7afb4b25ba5be0da8177ff3f49a8262a3e5f7498
2020-04-01 11:57:23 -07:00
joshmyersdean b1b7d9346b Fix tensorboard dependency issue
Former-commit-id: 9aa2e01e5169a685ecccad780b144cc28c23e919
2020-03-31 20:25:38 -07:00
milesial 490ecf8383 Rework of the transposed conv / bilinear up route
Former-commit-id: 07debeb9f2621b53ed513e5ab8a0307b4da57767
2020-03-30 20:17:52 -07:00
milesial 2bef826dcc Add tensorboard.dev link in the README
Former-commit-id: d685fe10ac571e28e818a9d8fb19013e3346ee5f
2020-03-15 22:37:20 -07:00
milesial d40a71737d LR scheduler + TensorBoard weights and grad hists
Former-commit-id: 0e7a96225ecc7761419aa67fef861ff6afae4c55
2020-03-15 21:38:51 -07:00
milesial 54ba0e5d54 Merge pull request #141 from whenyd/master
Apply sigmoid before calc dice in eval_net()

Former-commit-id: 32ee0fe21170e98f3edb51f8639d8b26d7ce3475
2020-03-14 15:02:50 -07:00
whenyd cf505c6549 Set drop_last=True for val_loader
Former-commit-id: adb1d7e9348a2707f38d9b86f57bb3ae2cbc2b73
2020-03-14 13:19:00 +08:00
whenyd d292e8c6cd Apply sigmoid before calc dice in eval_net()
Former-commit-id: 0da18fda34f29c81968425715e19c5dc76c9ec46
2020-03-14 13:16:52 +08:00
milesial d081192e90 Merge pull request #109 from ant-Korn/save_to_onnx
Corrected class Up for model to ONNX exporting

Former-commit-id: 060bdcd69886a3082a6f8fb7746e12d5fca3e360
2019-12-29 20:02:03 +01:00
Anton Kornilov 70e6ac4258 Corrected class Up for model to ONNX exporting
Former-commit-id: 2dceff8c909b16530e1291118a2165ea95744afd
2019-12-29 18:49:12 +03:00
milesial c0adecd5d6 Removed dense_crf (for real)
Former-commit-id: eb54ef62c6c893ab9e93d4a8095b75044c2d33a7
2019-12-27 18:30:23 +01:00
milesial 012fca4715 Removed dense_crf and small fixes
Former-commit-id: de7507ff08510b48e6a0e11da849e0d1c94d3ac8
2019-12-21 22:04:23 +01:00
milesial 5f4ce7dba9 Update mask type for muticlass
Former-commit-id: 4dcb7b8440c5f36ff2565c67f56f8f029b589c80
2019-12-13 17:36:12 +01:00
milesial 4e1f0398a1 Remove assert for multiclass
Former-commit-id: 16809ec7ba14f67bfa5e5a095d3b512ef669a964
2019-12-13 15:58:45 +01:00
milesial 67c4dd34a0 Use classmethod for preprocess
Former-commit-id: ebe3bbb3ca67502db407eaa8273071a871d4b744
2019-12-11 21:57:45 +01:00
milesial 0d1cc25ae2 Convert to tensor in predict.py
Former-commit-id: be1ad32304f2365c0c1db6b0e7fb835acc0fbfed
2019-12-04 12:43:04 +01:00
milesial 5a7e934560 Fix eval.py iterating within batch
Former-commit-id: d4b8040593d4bc82774b1dac647c701b2486c477
2019-12-02 12:06:29 +01:00
milesial 48f45274b7 Update README.md
Former-commit-id: 7cb24a105aa4261eb6daafbb9b0552fd0fdf6fd1
2019-11-23 18:09:00 +01:00
milesial 9d7be6e234 Cleanup + now using tensorboard
Former-commit-id: 79928c84cdf990ef6fe1043a3e4f74b9cc252642
2019-11-23 17:56:14 +01:00
milesial 35f955cbf8 Now using utils.data.Dataset
Former-commit-id: c75d9c075e18add5cd8683faf827937393bf2c94
2019-11-23 14:22:42 +01:00
milesial f5c2771242 Fix predict script (mistake from last commit)
Former-commit-id: 9fd386f5929945f3df1868930d392507fee16a55
2019-11-06 13:23:01 +01:00
milesial 8ed1e09b2a Better support for multiclass
Former-commit-id: 76bebf5f241f579fda7048f5e4a87ee9d49aa423
2019-10-30 19:54:57 +01:00
milesial 6f23624412 Fix typo
Former-commit-id: 72f12645410e87ba18093f055c9d8d9f8045595b
2019-10-30 12:27:03 +01:00
milesial 4c0f0a7a7b Global cleanup, better logging and CLI
Former-commit-id: ff1ac0936c118d129bc8a8014958948d3b3883be
2019-10-26 23:17:48 +02:00
milesial 74f825ce06 Fixed major data loading bug : #46 from pierrezeb/patch-1
Fix split_ids (returned only (id, 0))

The network is now training on both squares and not only the left part of the image

Former-commit-id: e2e46ce509382a45b1db4e1f639aeed568f6cb3e
2019-02-07 13:30:53 +01:00
pierrezeb 543e9e560c fix split_ids (returned only left square!!)
Former-commit-id: a357099e4eace375489f18babb2947d9103733fd
2019-02-07 16:43:47 +09:00
milesial 0f5e7cb0f9 Merge pull request #45 from dmitrysarov/master
evaluation fix : index + 1 in average

Former-commit-id: c8179b82ebe715817890a967b6775ef7875007b3
2019-01-09 14:32:55 +01:00
dmitrysarov 078b03ffa9 index + 1 in average
Former-commit-id: 1dc82b17f075a74f7ef6b20c888835497bcd690b
2019-01-09 15:01:42 +03:00
milesial ef36cad9ba Add note to use python 3 to README
Former-commit-id: fd16a756231b24b5d51810244415a70198492ef9
2018-12-28 17:56:15 +01:00
milesial d3150e8923 Fix upsampling issues (maybe) (#38, #32)
Former-commit-id: 0f45521480d2de8a93407ce43a2a813eefd5d1f6
2018-11-19 11:51:46 +01:00
milesial 5da5e17c08 Merge pull request #37 from rht/master
Move the sigmoid activation to the model itself

Former-commit-id: 7dd7c8b6346033ed1b15a2c1ab54847016a826db
2018-11-11 20:56:15 +01:00
rht 81234be7da Move the sigmoid activation to the model itself
Former-commit-id: e3f8ca7b1ac7c5e9694637a81be260e9b48973b9
2018-11-10 23:11:52 +00:00
milesial 46d1db3115 Another error in diceloss
Former-commit-id: 24a26eaa42b2a8e24335a421047af37cd11adb85
2018-10-28 14:54:14 +01:00
milesial 7e5a8727de Fixed math error in DiceLoss backward pass (#35)
Former-commit-id: 649124b3bd26272bb8442843a546c4e895ec14ff
2018-10-26 18:53:05 +02:00
milesial f2d88f98a7 Switch net to eval mode in predict.py
Former-commit-id: 3af421f3060c30b19ee38bc6e00db2593e53ad62
2018-09-26 08:59:49 +02:00
milesial 341824fb06 Switch net to train mode in train.py
Former-commit-id: ab255c4b3b823dfe8681083aeac0ee78c1a54780
2018-09-26 08:58:49 +02:00
milesial b1ac7151b4 Switch net to eval mode in eval.py
Former-commit-id: 3ab827241455818c7b81172a426d805f9ace0f8f
2018-09-26 08:57:10 +02:00
milesial 3fefc25199 Fixed misuse of epsilon in Dice loss (issue #24)
Former-commit-id: 1e8093de0398364cc65f3c7722b61a0f560df104
2018-08-16 19:50:24 +02:00
milesial f991ffa23e Merge pull request #20 from changjo/patch-1
Fixed argument actions

Former-commit-id: 23e817310461f79888078a2a1ab4b2187a97dc88
2018-07-10 13:17:51 +02:00
Chang Jo Kim 179b08e6a3 Fixed argument actions
Former-commit-id: 7f855d53668a576236b16670fd052d8caf816d80
2018-07-10 11:19:03 +09:00
milesial 14e0ff1c62 Merge pull request #13 from ZiyuanTonyZhang/master
fix scaling issue

Former-commit-id: b282e761f04904697418c9e759d761004a045428
2018-06-23 19:59:38 +02:00
milesial bc465b2d91 Fixed some details on predict + requirements
Former-commit-id: d04263be694bba9dc1cfeb96389a3ad2a4015841
2018-06-23 19:57:53 +02:00
ZiyuanTonyZhang ff85f85dcc fix scaling issue by size change from net, i.e. Issues - error in predict.py #12
Former-commit-id: 4af6e54bd4e1c642282fe512d97aa5a09ce16fca
2018-06-17 02:31:42 -04:00