REVA-QCAV/predict.py

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import argparse
import os
import numpy as np
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import torch
import torch.nn.functional as F
from PIL import Image
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from unet import UNet
from utils import resize_and_crop, normalize, split_img_into_squares, hwc_to_chw, merge_masks, dense_crf
from utils import plot_img_and_mask
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def predict_img(net,
full_img,
scale_factor=0.5,
out_threshold=0.5,
use_dense_crf=True,
use_gpu=False):
img_height = full_img.size[1]
img_width = full_img.size[0]
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img = resize_and_crop(full_img, scale=scale_factor)
img = normalize(img)
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left_square, right_square = split_img_into_squares(img)
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left_square = hwc_to_chw(left_square)
right_square = hwc_to_chw(right_square)
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X_left = torch.from_numpy(left_square).unsqueeze(0)
X_right = torch.from_numpy(right_square).unsqueeze(0)
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if use_gpu:
X_left = X_left.cuda()
X_right = X_right.cuda()
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with torch.no_grad():
output_left = net(X_left)
output_right = net(X_right)
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left_probs = F.sigmoid(output_left)
right_probs = F.sigmoid(output_right)
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left_probs = F.upsample(left_probs, size=(img_height, img_height))
right_probs = F.upsample(right_probs, size=(img_height, img_height))
left_mask_np = left_probs.squeeze().cpu().numpy()
right_mask_np = right_probs.squeeze().cpu().numpy()
full_mask = merge_masks(left_mask_np, right_mask_np, img_width)
if use_dense_crf:
full_mask = dense_crf(np.array(full_img).astype(np.uint8), full_mask)
return full_mask > out_threshold
def get_args():
parser = argparse.ArgumentParser()
parser.add_argument('--model', '-m', default='MODEL.pth',
metavar='FILE',
help="Specify the file in which is stored the model"
" (default : 'MODEL.pth')")
parser.add_argument('--input', '-i', metavar='INPUT', nargs='+',
help='filenames of input images', required=True)
parser.add_argument('--output', '-o', metavar='INPUT', nargs='+',
help='filenames of ouput images')
parser.add_argument('--cpu', '-c', action='store_true',
help="Do not use the cuda version of the net",
default=False)
parser.add_argument('--viz', '-v', action='store_true',
help="Visualize the images as they are processed",
default=False)
parser.add_argument('--no-save', '-n', action='store_false',
help="Do not save the output masks",
default=False)
parser.add_argument('--no-crf', '-r', action='store_false',
help="Do not use dense CRF postprocessing",
default=False)
parser.add_argument('--mask-threshold', '-t', type=float,
help="Minimum probability value to consider a mask pixel white",
default=0.5)
parser.add_argument('--scale', '-s', type=float,
help="Scale factor for the input images",
default=0.5)
return parser.parse_args()
def get_output_filenames(args):
in_files = args.input
out_files = []
if not args.output:
for f in in_files:
pathsplit = os.path.splitext(f)
out_files.append("{}_OUT{}".format(pathsplit[0], pathsplit[1]))
elif len(in_files) != len(args.output):
print("Error : Input files and output files are not of the same length")
raise SystemExit()
else:
out_files = args.output
return out_files
def mask_to_image(mask):
return Image.fromarray((mask * 255).astype(np.uint8))
if __name__ == "__main__":
args = get_args()
in_files = args.input
out_files = get_output_filenames(args)
net = UNet(n_channels=3, n_classes=1)
print("Loading model {}".format(args.model))
if not args.cpu:
print("Using CUDA version of the net, prepare your GPU !")
net.cuda()
net.load_state_dict(torch.load(args.model))
else:
net.cpu()
net.load_state_dict(torch.load(args.model, map_location='cpu'))
print("Using CPU version of the net, this may be very slow")
print("Model loaded !")
for i, fn in enumerate(in_files):
print("\nPredicting image {} ...".format(fn))
img = Image.open(fn)
if img.size[0] < img.size[1]:
print("Error: image height larger than the width")
mask = predict_img(net=net,
full_img=img,
scale_factor=args.scale,
out_threshold=args.mask_threshold,
use_dense_crf= not args.no_crf,
use_gpu=not args.cpu)
if args.viz:
print("Visualizing results for image {}, close to continue ...".format(fn))
plot_img_and_mask(img, mask)
if not args.no_save:
out_fn = out_files[i]
result = mask_to_image(mask)
result.save(out_files[i])
print("Mask saved to {}".format(out_files[i]))